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Dynamic Gene Expression Profile Changes in Synovial Fluid Following Meniscal Injury; Osteoarthritis (OA) Markers Found
Authors: Danica D. Vance*, Liyong Wang, Evadnie Rampersaud, Bryson P. Lesniak, Jeffery M. Vance, Margaret A. Pericak-Vance and Lee D. Kaplan
Number of views: 492
Purpose: We hypothesize that molecular changes leading
to Osteoarthritis (OA) occur soon after a meniscal tear and long
before the manifestation of OA. We sought to characterize the gene
expression profile in synovial fluid at different time points following
a meniscal tear with a focused examination on inflammatory and
arthritis related genetic markers.
Methods: Synovial fluid was collected from 8 male patients
(24~48yrs old) with evidence of meniscal injury on Magnetic
Resonance Imaging (MRI). Illumina humanht-12 microarray and
RNA-Seq were used to characterize gene expression profile in cell
pellets and supernatant, respectively. Unsupervised clustering
analysis was performed to identify patterns of gene expression
profile among samples. Metacore was utilized to perform pathway
analysis. T-tests with False Discovery Rate (FDR) corrections were
used to compare subset of genes among individuals.
Results: Individuals with short injury duration (< 2 months)
had distinct expression signatures than the rest, in both cell pellet
and supernatant analyses. In the cell pellets, among genes previously
linked to inflammatory or arthritic conditions, IL 1B, IL1RN, ILF2,
NFKB1, IL10RB, IL18BP, ILF3, IL13RA, BMP2K and IL10RB were
significantly upregulated (adjusted p < 0.05) in individuals with
long duration compared to individuals with shorter injury duration
in the microarray analysis. In the cell-free supernatant, 764 RNA
species were identified and 65 RNA species were down-regulated
and 78 RNA species were up-regulated (FDR < 0.05) in individuals
with short compared to individuals with long injury duration. The
most differentially expressed gene in the supernatant is SLC2A9 (P =
1.2x10-13; FDR = 9.6x10-11). In the cell pellet, the top 5% expressed
genes are enriched for inflammatory and cytoskeleton remodeling
pathways. Among them LAIR 1, TMSB4X, CCR6, IL18 and IL10; all have
been implicated in arthritic conditions.
Conclusions: Molecular changes contributing to OA development
occur earlier than previously described and potentially evolve or
change over time.
Clinical Relevance: Our data suggest the potential for early
interventions to halt detrimental molecular changes following
meniscal injury, thereby reducing the susceptibility of patients to OA
following a meniscal tear.
Keywords: Meniscus; Meniscal tear; Gene expression; Synovial
fluid; Microarray; Osteoarthritis